Mapped reads for uncultivated Halieaceae bacterium UBA11193 genome re... - SRA

SRX3577934: Mapped reads for uncultivated Halieaceae bacterium UBA11193 genome recovered from ERX714316
1 ILLUMINA (Illumina MiSeq) run: 104,141 spots, 39.4M bases, 14.6Mb downloads

Design: Reads from ERX714316 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA11193 genome.

Submitted by: University of Queensland

Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.

PRJNA417962 • SRP130174 • All experiments • All runs

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Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.

Sample: Uncultivated Halieaceae bacterium UBA11193 genome recovered from ERX714316

SAMN08019661 • SRS2847663 • All experiments • All runs

Organism: Halieaceae bacterium

Library:

Name: UBA11193_library

Instrument: Illumina MiSeq

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 104,141 spots, 39.4M bases, 14.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR6487861	104,141	39.4M	14.6Mb	2018-02-23

ID:: 4963436

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